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Pipeline Reconciliation, Cohort Overlap, and Parity Ledger

Source: R/reconciliation.R
reconciliation.Rd

Provides tools for comparing and validating new OMOP pipelines against legacy implementations:

  • cohort_from_index_stays: Maps external/legacy index stays to OMOP person_id and visit_occurrence_id.

  • compare_feature_tables: Feature-by-feature parity ledger with SMD, correlations, and scale checks.

  • cohort_overlap: Reconciles two cohort definitions with Jaccard overlap and outcome rate deltas.

  • run_study_grid: Sensitivity grid executing multiple study specification variants side by side.